1.     Xu, Y. #, J. Zhu#, W. Huang#, K. Xu, R. Yang, Q.C. Zhang*, and L. Sun*. PrismNet: predicting protein–RNA interaction using in vivo RNA structural information. Nucleic Acids Research, gkad353 (2023).

2.     Zhang, J. #, Y. Fei#, L. Sun*, Q.C. Zhang *. Advances and opportunities in RNA structure experimental determination and computational modeling, Nature Methods 19 (10), 1193-1207 (2022).  

3.     Sun, Lei *, P. Li*, X. Ju*, J. Rao*, W. Huang*, L.Ren, S. Zhang, T. Xiong, K. Xu, X. Zhou, M. Gong, E. Miska, Q. Ding #, J. Wang #, Q.C. Zhang #. In vivo structural characterization of the whole SARS-CoV-2 RNA genome identifies host cell target proteins vulnerable to re-purposed drugs. Cell, 184, 1865-1883. (2021).

4.     Sun, L. #, K. Xu#, W. Huang #, Y.T. Yang#, P. Li, L. Tang, T. Xiong, and Q.C. Zhang. Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure. Cell Research, 31(5), 495-516, (2021).

5.     Sun, L.^#, F. M. Fazal^#, P. Li^#, J. P. Broughton, B. Lee, L. Tang, W. Huang, E. T. Kool, H. Y. Chang* and Q. C. Zhang* "RNA structure maps across mammalian cellular compartments." Nature structural # molecular biology, 26 (4), 322-330 (2019).

6.     Lu S.#, Y. Tang#, S. Yin, L. Sun*. RNA structure: implications in viral infections and neurodegenerative diseases. Advanced Biotechnology, 2(3), (2024)